Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6CP48668 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT6CP48668 CA15P1-201ENST00000481698 905 ntBASIC17.94■□□□□ 0.46
KRT6CP48668 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.94■□□□□ 0.46
KRT6CP48668 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6CP48668 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6CP48668 AL049637.2-201ENST00000641778 930 ntBASIC17.94■□□□□ 0.46
KRT6CP48668 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.94■□□□□ 0.46
KRT6CP48668 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
KRT6CP48668 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.94■□□□□ 0.46
KRT6CP48668 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.94■□□□□ 0.46
KRT6CP48668 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.94■□□□□ 0.46
KRT6CP48668 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
KRT6CP48668 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
KRT6CP48668 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT6CP48668 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
KRT6CP48668 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT6CP48668 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
KRT6CP48668 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.93■□□□□ 0.46
KRT6CP48668 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KRT6CP48668 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.93■□□□□ 0.46
KRT6CP48668 AL023284.2-201ENST00000405850 579 ntBASIC17.93■□□□□ 0.46
KRT6CP48668 AL355355.2-201ENST00000442321 338 ntBASIC17.93■□□□□ 0.46
KRT6CP48668 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT6CP48668 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.93■□□□□ 0.46
KRT6CP48668 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.93■□□□□ 0.46
KRT6CP48668 AC113410.3-201ENST00000623366 203 ntBASIC17.93■□□□□ 0.46
KRT6CP48668 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
KRT6CP48668 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
KRT6CP48668 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.93■□□□□ 0.46
KRT6CP48668 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
KRT6CP48668 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
KRT6CP48668 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
KRT6CP48668 MIR564-202ENST00000385049 94 ntBASIC17.92■□□□□ 0.46
KRT6CP48668 AP000593.1-201ENST00000393668 712 ntBASIC17.92■□□□□ 0.46
KRT6CP48668 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT6CP48668 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT6CP48668 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.92■□□□□ 0.46
KRT6CP48668 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT6CP48668 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
KRT6CP48668 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT6CP48668 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
KRT6CP48668 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
KRT6CP48668 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.92■□□□□ 0.46
KRT6CP48668 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.91■□□□□ 0.46
KRT6CP48668 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6CP48668 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
KRT6CP48668 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6CP48668 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
KRT6CP48668 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.91■□□□□ 0.46
KRT6CP48668 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6CP48668 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6CP48668 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
KRT6CP48668 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
KRT6CP48668 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.91■□□□□ 0.46
KRT6CP48668 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.91■□□□□ 0.46
KRT6CP48668 REXO1L10P-201ENST00000615707 1290 ntBASIC17.91■□□□□ 0.46
KRT6CP48668 REXO1L12P-201ENST00000622156 912 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms