Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT20P35900 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.6■□□□□ 0.41
KRT20P35900 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT20P35900 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT20P35900 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.6■□□□□ 0.41
KRT20P35900 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT20P35900 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KRT20P35900 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT20P35900 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.6■□□□□ 0.41
KRT20P35900 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT20P35900 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KRT20P35900 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KRT20P35900 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
KRT20P35900 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT20P35900 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT20P35900 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT20P35900 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 KRT8P11-201ENST00000409686 1436 ntBASIC17.59■□□□□ 0.41
KRT20P35900 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.59■□□□□ 0.41
KRT20P35900 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT20P35900 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT20P35900 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.59■□□□□ 0.41
KRT20P35900 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.59■□□□□ 0.41
KRT20P35900 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.59■□□□□ 0.41
KRT20P35900 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KRT20P35900 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
KRT20P35900 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
KRT20P35900 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KRT20P35900 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.58■□□□□ 0.41
KRT20P35900 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.58■□□□□ 0.41
KRT20P35900 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
KRT20P35900 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
KRT20P35900 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
KRT20P35900 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KRT20P35900 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KRT20P35900 MESTP1-201ENST00000404287 994 ntBASIC17.58■□□□□ 0.4
KRT20P35900 CRYGFP-201ENST00000418459 633 ntBASIC17.58■□□□□ 0.4
KRT20P35900 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.58■□□□□ 0.4
KRT20P35900 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
KRT20P35900 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
KRT20P35900 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
KRT20P35900 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.58■□□□□ 0.4
KRT20P35900 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.58■□□□□ 0.4
KRT20P35900 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KRT20P35900 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
KRT20P35900 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.57■□□□□ 0.4
KRT20P35900 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KRT20P35900 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KRT20P35900 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
KRT20P35900 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 IRX1P1-201ENST00000438849 1838 ntBASIC17.57■□□□□ 0.4
KRT20P35900 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.57■□□□□ 0.4
KRT20P35900 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT20P35900 MFAP1P1-201ENST00000442257 1255 ntBASIC17.57■□□□□ 0.4
KRT20P35900 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT20P35900 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
KRT20P35900 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.57■□□□□ 0.4
KRT20P35900 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms