Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.72■□□□□ 0.43
HTR1EP28566 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR1EP28566 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HTR1EP28566 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR1EP28566 AC135776.1-201ENST00000319817 2481 ntBASIC17.72■□□□□ 0.43
HTR1EP28566 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HTR1EP28566 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HTR1EP28566 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HTR1EP28566 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HTR1EP28566 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
HTR1EP28566 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 AC113347.1-201ENST00000413321 391 ntBASIC17.71■□□□□ 0.43
HTR1EP28566 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR1EP28566 KRT18P57-201ENST00000443599 1254 ntBASIC17.71■□□□□ 0.43
HTR1EP28566 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR1EP28566 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
HTR1EP28566 AP000525.1-201ENST00000608286 694 ntBASIC17.71■□□□□ 0.43
HTR1EP28566 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HTR1EP28566 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.71■□□□□ 0.43
HTR1EP28566 AC068587.9-201ENST00000641814 219 ntBASIC17.71■□□□□ 0.43
HTR1EP28566 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HTR1EP28566 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HTR1EP28566 GNAS-203ENST00000306120 1878 ntBASIC17.71■□□□□ 0.43
HTR1EP28566 KRT8P9-201ENST00000558927 1449 ntBASIC17.71■□□□□ 0.43
HTR1EP28566 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HTR1EP28566 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HTR1EP28566 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.71■□□□□ 0.42
HTR1EP28566 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.7■□□□□ 0.42
HTR1EP28566 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 MIR1238-201ENST00000408483 83 ntBASIC17.7■□□□□ 0.42
HTR1EP28566 NUDT16P1-203ENST00000513809 620 ntBASIC17.7■□□□□ 0.42
HTR1EP28566 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.7■□□□□ 0.42
HTR1EP28566 MYC-208ENST00000641036 567 ntBASIC17.7■□□□□ 0.42
HTR1EP28566 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HTR1EP28566 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HTR1EP28566 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HTR1EP28566 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.69■□□□□ 0.42
HTR1EP28566 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.69■□□□□ 0.42
HTR1EP28566 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HTR1EP28566 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 AL137013.1-201ENST00000432946 1228 ntBASIC17.69■□□□□ 0.42
HTR1EP28566 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.69■□□□□ 0.42
HTR1EP28566 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.69■□□□□ 0.42
HTR1EP28566 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.69■□□□□ 0.42
HTR1EP28566 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.69■□□□□ 0.42
HTR1EP28566 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.69■□□□□ 0.42
HTR1EP28566 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HTR1EP28566 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.69■□□□□ 0.42
HTR1EP28566 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HTR1EP28566 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms