Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CAPN3P20807 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.82■□□□□ 0.44
CAPN3P20807 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CAPN3P20807 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN3P20807 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CAPN3P20807 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CAPN3P20807 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
CAPN3P20807 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.81■□□□□ 0.44
CAPN3P20807 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN3P20807 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN3P20807 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CAPN3P20807 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN3P20807 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.81■□□□□ 0.44
CAPN3P20807 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
CAPN3P20807 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN3P20807 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN3P20807 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.8■□□□□ 0.44
CAPN3P20807 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CAPN3P20807 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.8■□□□□ 0.44
CAPN3P20807 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 MTDHP1-201ENST00000605323 784 ntBASIC17.8■□□□□ 0.44
CAPN3P20807 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 AC008556.1-201ENST00000610908 2040 ntBASIC17.8■□□□□ 0.44
CAPN3P20807 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CAPN3P20807 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CAPN3P20807 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.8■□□□□ 0.44
CAPN3P20807 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 GNAS-203ENST00000306120 1878 ntBASIC17.8■□□□□ 0.44
CAPN3P20807 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CAPN3P20807 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CAPN3P20807 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.79■□□□□ 0.44
CAPN3P20807 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CAPN3P20807 AC138028.4-201ENST00000564984 1845 ntBASIC17.79■□□□□ 0.44
CAPN3P20807 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CAPN3P20807 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CAPN3P20807 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN3P20807 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN3P20807 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CAPN3P20807 KRT18P35-201ENST00000510488 1269 ntBASIC17.79■□□□□ 0.44
CAPN3P20807 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.79■□□□□ 0.44
CAPN3P20807 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms