Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SYN1P17600 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.05■□□□□ 0.8
SYN1P17600 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.05■□□□□ 0.8
SYN1P17600 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.05■□□□□ 0.8
SYN1P17600 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.05■□□□□ 0.8
SYN1P17600 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SYN1P17600 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SYN1P17600 AC009947.1-201ENST00000444350 727 ntBASIC20.05■□□□□ 0.8
SYN1P17600 ABCD1P5-201ENST00000445663 754 ntBASIC20.05■□□□□ 0.8
SYN1P17600 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.05■□□□□ 0.8
SYN1P17600 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SYN1P17600 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.05■□□□□ 0.8
SYN1P17600 MIR4469-201ENST00000583919 79 ntBASIC20.05■□□□□ 0.8
SYN1P17600 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.05■□□□□ 0.8
SYN1P17600 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.05■□□□□ 0.8
SYN1P17600 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYN1P17600 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.04■□□□□ 0.8
SYN1P17600 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.04■□□□□ 0.8
SYN1P17600 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.04■□□□□ 0.8
SYN1P17600 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.04■□□□□ 0.8
SYN1P17600 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.04■□□□□ 0.8
SYN1P17600 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.04■□□□□ 0.8
SYN1P17600 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.04■□□□□ 0.8
SYN1P17600 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.04■□□□□ 0.8
SYN1P17600 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.04■□□□□ 0.8
SYN1P17600 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 KRT8P32-201ENST00000512863 1461 ntBASIC20.04■□□□□ 0.8
SYN1P17600 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYN1P17600 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SYN1P17600 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYN1P17600 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYN1P17600 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SYN1P17600 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYN1P17600 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYN1P17600 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 ALG1L5P-201ENST00000482043 771 ntBASIC20.03■□□□□ 0.8
SYN1P17600 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.03■□□□□ 0.8
SYN1P17600 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.03■□□□□ 0.8
SYN1P17600 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SYN1P17600 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.03■□□□□ 0.8
SYN1P17600 MTDHP4-201ENST00000600287 670 ntBASIC20.03■□□□□ 0.8
SYN1P17600 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.03■□□□□ 0.8
SYN1P17600 AC064836.3-201ENST00000607928 673 ntBASIC20.03■□□□□ 0.8
SYN1P17600 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYN1P17600 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYN1P17600 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.03■□□□□ 0.8
SYN1P17600 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.03■□□□□ 0.8
SYN1P17600 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.03■□□□□ 0.8
SYN1P17600 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.02■□□□□ 0.8
SYN1P17600 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.02■□□□□ 0.8
SYN1P17600 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.02■□□□□ 0.8
SYN1P17600 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYN1P17600 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SYN1P17600 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYN1P17600 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SYN1P17600 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.02■□□□□ 0.79
SYN1P17600 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms