Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COL11A2P13942 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.56■■□□□ 1.2
COL11A2P13942 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC22.56■■□□□ 1.2
COL11A2P13942 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL11A2P13942 ABCD1P5-201ENST00000445663 754 ntBASIC22.56■■□□□ 1.2
COL11A2P13942 HS6ST1P1-201ENST00000481504 1234 ntBASIC22.56■■□□□ 1.2
COL11A2P13942 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.56■■□□□ 1.2
COL11A2P13942 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL11A2P13942 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.56■■□□□ 1.2
COL11A2P13942 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
COL11A2P13942 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
COL11A2P13942 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.55■■□□□ 1.2
COL11A2P13942 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL11A2P13942 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
COL11A2P13942 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
COL11A2P13942 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC22.55■■□□□ 1.2
COL11A2P13942 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.55■■□□□ 1.2
COL11A2P13942 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
COL11A2P13942 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC22.55■■□□□ 1.2
COL11A2P13942 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.55■■□□□ 1.2
COL11A2P13942 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
COL11A2P13942 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL11A2P13942 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
COL11A2P13942 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.55■■□□□ 1.2
COL11A2P13942 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
COL11A2P13942 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COL11A2P13942 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC22.55■■□□□ 1.2
COL11A2P13942 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
COL11A2P13942 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.54■■□□□ 1.2
COL11A2P13942 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.54■■□□□ 1.2
COL11A2P13942 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.54■■□□□ 1.2
COL11A2P13942 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC22.54■■□□□ 1.2
COL11A2P13942 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC22.54■■□□□ 1.2
COL11A2P13942 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.54■■□□□ 1.2
COL11A2P13942 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.54■■□□□ 1.2
COL11A2P13942 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COL11A2P13942 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC22.53■■□□□ 1.2
COL11A2P13942 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL11A2P13942 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.53■■□□□ 1.2
COL11A2P13942 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL11A2P13942 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL11A2P13942 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL11A2P13942 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.53■■□□□ 1.2
COL11A2P13942 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.53■■□□□ 1.2
COL11A2P13942 CAND2-206ENST00000626378 333 ntTSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 AP002414.3-201ENST00000589352 1468 ntBASIC22.53■■□□□ 1.2
COL11A2P13942 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
COL11A2P13942 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COL11A2P13942 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.53■■□□□ 1.2
COL11A2P13942 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.52■■□□□ 1.2
COL11A2P13942 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
COL11A2P13942 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.52■■□□□ 1.2
COL11A2P13942 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.52■■□□□ 1.2
COL11A2P13942 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 AC099343.3-201ENST00000605834 2503 ntBASIC22.52■■□□□ 1.2
COL11A2P13942 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
COL11A2P13942 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 AC125634.1-201ENST00000438758 1403 ntBASIC22.52■■□□□ 1.2
COL11A2P13942 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
COL11A2P13942 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
COL11A2P13942 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
COL11A2P13942 AC004967.1-201ENST00000453589 447 ntBASIC22.51■■□□□ 1.19
COL11A2P13942 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC22.51■■□□□ 1.19
COL11A2P13942 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.51■■□□□ 1.19
COL11A2P13942 AC027796.2-201ENST00000575326 344 ntBASIC22.51■■□□□ 1.19
COL11A2P13942 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.51■■□□□ 1.19
COL11A2P13942 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
COL11A2P13942 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL11A2P13942 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.51■■□□□ 1.19
COL11A2P13942 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL11A2P13942 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL11A2P13942 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
COL11A2P13942 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL11A2P13942 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COL11A2P13942 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
COL11A2P13942 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms