Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FAM228BP0C875 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
FAM228BP0C875 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
FAM228BP0C875 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 AC098590.1-201ENST00000468126 897 ntBASIC19.73■□□□□ 0.75
FAM228BP0C875 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.73■□□□□ 0.75
FAM228BP0C875 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.73■□□□□ 0.75
FAM228BP0C875 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FAM228BP0C875 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FAM228BP0C875 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
FAM228BP0C875 AC034236.2-201ENST00000606662 1610 ntBASIC19.73■□□□□ 0.75
FAM228BP0C875 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
FAM228BP0C875 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.72■□□□□ 0.75
FAM228BP0C875 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM228BP0C875 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FAM228BP0C875 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM228BP0C875 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 AP000593.1-201ENST00000393668 712 ntBASIC19.72■□□□□ 0.75
FAM228BP0C875 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.72■□□□□ 0.75
FAM228BP0C875 AC097488.1-201ENST00000507834 756 ntBASIC19.72■□□□□ 0.75
FAM228BP0C875 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.72■□□□□ 0.75
FAM228BP0C875 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FAM228BP0C875 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FAM228BP0C875 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
FAM228BP0C875 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
FAM228BP0C875 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 LTB4R2-202ENST00000528054 3092 ntBASIC19.71■□□□□ 0.75
FAM228BP0C875 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 RPS2P55-201ENST00000397318 883 ntBASIC19.71■□□□□ 0.75
FAM228BP0C875 AC107956.1-201ENST00000494359 873 ntBASIC19.71■□□□□ 0.75
FAM228BP0C875 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 AC142381.4-202ENST00000563973 229 ntBASIC19.71■□□□□ 0.75
FAM228BP0C875 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.71■□□□□ 0.75
FAM228BP0C875 MIR4674-201ENST00000582457 87 ntBASIC19.71■□□□□ 0.75
FAM228BP0C875 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.71■□□□□ 0.75
FAM228BP0C875 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
FAM228BP0C875 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FAM228BP0C875 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FAM228BP0C875 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FAM228BP0C875 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
FAM228BP0C875 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.71■□□□□ 0.75
FAM228BP0C875 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
FAM228BP0C875 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FAM228BP0C875 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
FAM228BP0C875 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 AL096828.2-201ENST00000567259 1965 ntBASIC19.7■□□□□ 0.74
FAM228BP0C875 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM228BP0C875 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
FAM228BP0C875 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FAM228BP0C875 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.7■□□□□ 0.74
FAM228BP0C875 REXO1L10P-201ENST00000615707 1290 ntBASIC19.7■□□□□ 0.74
FAM228BP0C875 REXO1L12P-201ENST00000622156 912 ntBASIC19.7■□□□□ 0.74
FAM228BP0C875 AC113410.3-201ENST00000623366 203 ntBASIC19.7■□□□□ 0.74
FAM228BP0C875 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM228BP0C875 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.7■□□□□ 0.74
FAM228BP0C875 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
FAM228BP0C875 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FAM228BP0C875 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms