Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 EGLN1P1-201ENST00000531623 762 ntBASIC16.41■□□□□ 0.22
ERCC1P07992 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.41■□□□□ 0.22
ERCC1P07992 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ERCC1P07992 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ERCC1P07992 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
ERCC1P07992 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 BICD1-207ENST00000551848 1962 ntBASIC16.4■□□□□ 0.22
ERCC1P07992 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC1P07992 TMPOP1-202ENST00000424642 1267 ntBASIC16.4■□□□□ 0.22
ERCC1P07992 AL137013.1-201ENST00000432946 1228 ntBASIC16.4■□□□□ 0.22
ERCC1P07992 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC1P07992 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC1P07992 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC1P07992 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.4■□□□□ 0.22
ERCC1P07992 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC1P07992 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.4■□□□□ 0.22
ERCC1P07992 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC1P07992 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC1P07992 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC1P07992 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
ERCC1P07992 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
ERCC1P07992 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 MESTP1-201ENST00000404287 994 ntBASIC16.39■□□□□ 0.21
ERCC1P07992 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 AC113347.1-201ENST00000413321 391 ntBASIC16.39■□□□□ 0.21
ERCC1P07992 MFAP1P1-201ENST00000442257 1255 ntBASIC16.39■□□□□ 0.21
ERCC1P07992 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.39■□□□□ 0.21
ERCC1P07992 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 AC116562.4-202ENST00000641738 218 ntBASIC16.39■□□□□ 0.21
ERCC1P07992 AC092865.7-201ENST00000641832 219 ntBASIC16.39■□□□□ 0.21
ERCC1P07992 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC1P07992 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC1P07992 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC1P07992 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
ERCC1P07992 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC1P07992 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC1P07992 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC1P07992 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms