Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.23■□□□□ 0.83
VTNP04004 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.23■□□□□ 0.83
VTNP04004 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.23■□□□□ 0.83
VTNP04004 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.23■□□□□ 0.83
VTNP04004 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.23■□□□□ 0.83
VTNP04004 AC090616.6-201ENST00000582640 721 ntBASIC20.23■□□□□ 0.83
VTNP04004 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.23■□□□□ 0.83
VTNP04004 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
VTNP04004 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VTNP04004 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.23■□□□□ 0.83
VTNP04004 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
VTNP04004 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VTNP04004 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.23■□□□□ 0.83
VTNP04004 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
VTNP04004 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.22■□□□□ 0.83
VTNP04004 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
VTNP04004 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 MIR149-201ENST00000384879 89 ntBASIC20.22■□□□□ 0.83
VTNP04004 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.22■□□□□ 0.83
VTNP04004 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.22■□□□□ 0.83
VTNP04004 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.22■□□□□ 0.83
VTNP04004 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VTNP04004 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
VTNP04004 MYLKP1-201ENST00000509077 1580 ntBASIC20.21■□□□□ 0.83
VTNP04004 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC20.21■□□□□ 0.83
VTNP04004 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
VTNP04004 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.21■□□□□ 0.83
VTNP04004 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.21■□□□□ 0.83
VTNP04004 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 AL691432.3-201ENST00000621860 400 ntBASIC20.21■□□□□ 0.83
VTNP04004 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.21■□□□□ 0.83
VTNP04004 AC009102.3-201ENST00000623118 1491 ntBASIC20.21■□□□□ 0.83
VTNP04004 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
VTNP04004 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
VTNP04004 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
VTNP04004 AL353692.3-201ENST00000407031 1396 ntBASIC20.21■□□□□ 0.83
VTNP04004 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 AC120498.9-201ENST00000339021 3867 ntBASIC20.2■□□□□ 0.82
VTNP04004 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VTNP04004 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
VTNP04004 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.2■□□□□ 0.82
VTNP04004 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 UNC93B7-201ENST00000509439 705 ntBASIC20.2■□□□□ 0.82
VTNP04004 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.2■□□□□ 0.82
VTNP04004 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.2■□□□□ 0.82
VTNP04004 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.2■□□□□ 0.82
VTNP04004 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 AL592071.1-201ENST00000611956 408 ntBASIC20.2■□□□□ 0.82
VTNP04004 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
VTNP04004 AC124864.1-201ENST00000623408 392 ntBASIC20.2■□□□□ 0.82
VTNP04004 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.2■□□□□ 0.82
VTNP04004 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
VTNP04004 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
VTNP04004 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
VTNP04004 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.19■□□□□ 0.82
VTNP04004 AC005082.1-201ENST00000413042 2259 ntBASIC20.19■□□□□ 0.82
VTNP04004 KRT89P-201ENST00000620027 1478 ntBASIC20.19■□□□□ 0.82
VTNP04004 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
VTNP04004 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
VTNP04004 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.19■□□□□ 0.82
VTNP04004 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms