Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.61■□□□□ 0.25
ZIC3O60481 AP000550.4-202ENST00000639755 178 ntBASIC16.61■□□□□ 0.25
ZIC3O60481 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZIC3O60481 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZIC3O60481 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.61■□□□□ 0.25
ZIC3O60481 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.61■□□□□ 0.25
ZIC3O60481 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZIC3O60481 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ZIC3O60481 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.6■□□□□ 0.25
ZIC3O60481 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.6■□□□□ 0.25
ZIC3O60481 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 AL645929.1-201ENST00000420084 975 ntBASIC16.6■□□□□ 0.25
ZIC3O60481 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.6■□□□□ 0.25
ZIC3O60481 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.6■□□□□ 0.25
ZIC3O60481 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ZIC3O60481 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 AL138781.2-201ENST00000617896 1843 ntBASIC16.6■□□□□ 0.25
ZIC3O60481 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.6■□□□□ 0.25
ZIC3O60481 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 IER3-202ENST00000376377 1350 ntBASIC16.6■□□□□ 0.25
ZIC3O60481 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.6■□□□□ 0.25
ZIC3O60481 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.6■□□□□ 0.25
ZIC3O60481 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZIC3O60481 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 AL162741.1-201ENST00000565563 1558 ntBASIC16.6■□□□□ 0.25
ZIC3O60481 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZIC3O60481 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.59■□□□□ 0.25
ZIC3O60481 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.59■□□□□ 0.25
ZIC3O60481 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.59■□□□□ 0.25
ZIC3O60481 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.59■□□□□ 0.25
ZIC3O60481 WIZP1-201ENST00000531444 2299 ntBASIC16.59■□□□□ 0.25
ZIC3O60481 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.59■□□□□ 0.25
ZIC3O60481 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.59■□□□□ 0.25
ZIC3O60481 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZIC3O60481 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.58■□□□□ 0.25
ZIC3O60481 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.58■□□□□ 0.25
ZIC3O60481 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.58■□□□□ 0.25
ZIC3O60481 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.58■□□□□ 0.25
ZIC3O60481 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZIC3O60481 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZIC3O60481 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.58■□□□□ 0.24
ZIC3O60481 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.58■□□□□ 0.24
ZIC3O60481 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.58■□□□□ 0.24
ZIC3O60481 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.58■□□□□ 0.24
ZIC3O60481 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.58■□□□□ 0.24
ZIC3O60481 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.58■□□□□ 0.24
ZIC3O60481 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.58■□□□□ 0.24
ZIC3O60481 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZIC3O60481 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ZIC3O60481 AC024563.2-201ENST00000603282 481 ntBASIC16.58■□□□□ 0.24
ZIC3O60481 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.58■□□□□ 0.24
ZIC3O60481 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.58■□□□□ 0.24
ZIC3O60481 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZIC3O60481 AC073592.3-201ENST00000625118 1834 ntBASIC16.58■□□□□ 0.24
ZIC3O60481 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZIC3O60481 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZIC3O60481 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZIC3O60481 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZIC3O60481 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZIC3O60481 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms