Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGA12O60330 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA12O60330 KRT8P7-201ENST00000533003 1432 ntBASIC18.32■□□□□ 0.52
PCDHGA12O60330 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 TPSP2-201ENST00000561760 610 ntBASIC18.31■□□□□ 0.52
PCDHGA12O60330 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA12O60330 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA12O60330 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 AC138932.1-201ENST00000534164 6830 ntBASIC18.3■□□□□ 0.52
PCDHGA12O60330 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 PVRIG2P-201ENST00000435460 978 ntBASIC18.3■□□□□ 0.52
PCDHGA12O60330 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.3■□□□□ 0.52
PCDHGA12O60330 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA12O60330 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHGA12O60330 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 AC012615.1-201ENST00000565797 1299 ntBASIC18.29■□□□□ 0.52
PCDHGA12O60330 LINC01711-201ENST00000598340 967 ntBASIC18.29■□□□□ 0.52
PCDHGA12O60330 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHGA12O60330 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHGA12O60330 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHGA12O60330 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHGA12O60330 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms