Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.68■□□□□ 0.42
LCMT2O60294 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.68■□□□□ 0.42
LCMT2O60294 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.68■□□□□ 0.42
LCMT2O60294 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
LCMT2O60294 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.68■□□□□ 0.42
LCMT2O60294 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
LCMT2O60294 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LCMT2O60294 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LCMT2O60294 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.67■□□□□ 0.42
LCMT2O60294 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.67■□□□□ 0.42
LCMT2O60294 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.67■□□□□ 0.42
LCMT2O60294 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.67■□□□□ 0.42
LCMT2O60294 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LCMT2O60294 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.67■□□□□ 0.42
LCMT2O60294 AC090164.3-201ENST00000610780 2143 ntBASIC17.67■□□□□ 0.42
LCMT2O60294 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
LCMT2O60294 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LCMT2O60294 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LCMT2O60294 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LCMT2O60294 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LCMT2O60294 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
LCMT2O60294 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
LCMT2O60294 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.66■□□□□ 0.42
LCMT2O60294 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LCMT2O60294 RNF152P1-201ENST00000397754 604 ntBASIC17.66■□□□□ 0.42
LCMT2O60294 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.66■□□□□ 0.42
LCMT2O60294 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LCMT2O60294 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.66■□□□□ 0.42
LCMT2O60294 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
LCMT2O60294 MIR3917-201ENST00000580971 93 ntBASIC17.66■□□□□ 0.42
LCMT2O60294 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.66■□□□□ 0.42
LCMT2O60294 AL157888.1-201ENST00000631930 593 ntBASIC17.66■□□□□ 0.42
LCMT2O60294 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.66■□□□□ 0.42
LCMT2O60294 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.66■□□□□ 0.42
LCMT2O60294 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LCMT2O60294 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LCMT2O60294 SDHAP2-201ENST00000455183 2001 ntBASIC17.65■□□□□ 0.42
LCMT2O60294 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LCMT2O60294 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LCMT2O60294 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.65■□□□□ 0.42
LCMT2O60294 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LCMT2O60294 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LCMT2O60294 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.65■□□□□ 0.42
LCMT2O60294 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LCMT2O60294 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LCMT2O60294 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms