Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RIPK2O43353 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.79■□□□□ 0.6
RIPK2O43353 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RIPK2O43353 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.79■□□□□ 0.6
RIPK2O43353 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.79■□□□□ 0.6
RIPK2O43353 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.79■□□□□ 0.6
RIPK2O43353 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RIPK2O43353 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.79■□□□□ 0.6
RIPK2O43353 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RIPK2O43353 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
RIPK2O43353 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.79■□□□□ 0.6
RIPK2O43353 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RIPK2O43353 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
RIPK2O43353 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.78■□□□□ 0.6
RIPK2O43353 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.78■□□□□ 0.6
RIPK2O43353 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.78■□□□□ 0.6
RIPK2O43353 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.78■□□□□ 0.6
RIPK2O43353 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
RIPK2O43353 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 AL138781.1-201ENST00000566567 1274 ntBASIC18.78■□□□□ 0.6
RIPK2O43353 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.78■□□□□ 0.6
RIPK2O43353 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.78■□□□□ 0.6
RIPK2O43353 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.78■□□□□ 0.6
RIPK2O43353 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RIPK2O43353 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
RIPK2O43353 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.77■□□□□ 0.6
RIPK2O43353 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.77■□□□□ 0.6
RIPK2O43353 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.77■□□□□ 0.6
RIPK2O43353 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.77■□□□□ 0.6
RIPK2O43353 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
RIPK2O43353 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.77■□□□□ 0.6
RIPK2O43353 PHGDH-209ENST00000641074 1780 ntBASIC18.77■□□□□ 0.6
RIPK2O43353 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.77■□□□□ 0.6
RIPK2O43353 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RIPK2O43353 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RIPK2O43353 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RIPK2O43353 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RIPK2O43353 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
RIPK2O43353 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RIPK2O43353 AC006116.8-202ENST00000587620 1550 ntBASIC18.76■□□□□ 0.59
RIPK2O43353 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RIPK2O43353 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.76■□□□□ 0.59
RIPK2O43353 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.76■□□□□ 0.59
RIPK2O43353 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RIPK2O43353 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.76■□□□□ 0.59
RIPK2O43353 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RIPK2O43353 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms