Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 COX11P1-201ENST00000489116 835 ntBASIC20.16■□□□□ 0.82
TGFB1I1O43294 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TGFB1I1O43294 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 AC139887.4-201ENST00000607877 719 ntBASIC20.16■□□□□ 0.82
TGFB1I1O43294 AC011558.1-201ENST00000623459 338 ntBASIC20.16■□□□□ 0.82
TGFB1I1O43294 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TGFB1I1O43294 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TGFB1I1O43294 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TGFB1I1O43294 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TGFB1I1O43294 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TGFB1I1O43294 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TGFB1I1O43294 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 AP000523.1-201ENST00000398242 1049 ntBASIC20.15■□□□□ 0.82
TGFB1I1O43294 RCN1P1-201ENST00000400413 996 ntBASIC20.15■□□□□ 0.82
TGFB1I1O43294 AC117947.1-201ENST00000427448 529 ntBASIC20.15■□□□□ 0.82
TGFB1I1O43294 BX664615.1-201ENST00000443558 458 ntBASIC20.15■□□□□ 0.82
TGFB1I1O43294 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 AC006011.2-201ENST00000621313 1158 ntBASIC20.15■□□□□ 0.82
TGFB1I1O43294 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TGFB1I1O43294 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TGFB1I1O43294 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TGFB1I1O43294 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
TGFB1I1O43294 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
TGFB1I1O43294 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 YBX1P2-201ENST00000489612 999 ntBASIC20.14■□□□□ 0.81
TGFB1I1O43294 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 AL157888.1-201ENST00000631930 593 ntBASIC20.14■□□□□ 0.81
TGFB1I1O43294 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TGFB1I1O43294 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.14■□□□□ 0.81
TGFB1I1O43294 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 LINC01126-201ENST00000623515 1646 ntBASIC20.13■□□□□ 0.81
TGFB1I1O43294 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.13■□□□□ 0.81
TGFB1I1O43294 AL390961.4-201ENST00000623958 2535 ntBASIC20.13■□□□□ 0.81
TGFB1I1O43294 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TGFB1I1O43294 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.12■□□□□ 0.81
TGFB1I1O43294 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms