Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.49■□□□□ 0.55
MID1O15344 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 IGHGP-201ENST00000390555 1178 ntBASIC18.49■□□□□ 0.55
MID1O15344 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.49■□□□□ 0.55
MID1O15344 AP000867.3-201ENST00000524675 377 ntBASIC18.49■□□□□ 0.55
MID1O15344 IGHV3-41-201ENST00000613121 348 ntBASIC18.49■□□□□ 0.55
MID1O15344 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 AC099343.3-201ENST00000605834 2503 ntBASIC18.49■□□□□ 0.55
MID1O15344 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
MID1O15344 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MID1O15344 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
MID1O15344 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 TPM4P1-201ENST00000436100 807 ntBASIC18.48■□□□□ 0.55
MID1O15344 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.48■□□□□ 0.55
MID1O15344 TOB2P1-201ENST00000469761 992 ntBASIC18.48■□□□□ 0.55
MID1O15344 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.48■□□□□ 0.55
MID1O15344 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 AC090616.6-201ENST00000582640 721 ntBASIC18.48■□□□□ 0.55
MID1O15344 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.48■□□□□ 0.55
MID1O15344 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.48■□□□□ 0.55
MID1O15344 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MID1O15344 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MID1O15344 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.47■□□□□ 0.55
MID1O15344 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.47■□□□□ 0.55
MID1O15344 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.47■□□□□ 0.55
MID1O15344 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.47■□□□□ 0.55
MID1O15344 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
MID1O15344 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.47■□□□□ 0.55
MID1O15344 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.47■□□□□ 0.55
MID1O15344 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.47■□□□□ 0.55
MID1O15344 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.47■□□□□ 0.55
MID1O15344 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MID1O15344 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
MID1O15344 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MID1O15344 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
MID1O15344 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.46■□□□□ 0.55
MID1O15344 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.46■□□□□ 0.55
MID1O15344 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MID1O15344 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.46■□□□□ 0.55
MID1O15344 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.46■□□□□ 0.55
MID1O15344 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.46■□□□□ 0.55
MID1O15344 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MID1O15344 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.46■□□□□ 0.55
MID1O15344 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms