Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLDN4O14493 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 KRT8P50-201ENST00000562022 1438 ntBASIC17.41■□□□□ 0.38
CLDN4O14493 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLDN4O14493 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 MIR1224-201ENST00000408193 85 ntBASIC17.41■□□□□ 0.38
CLDN4O14493 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.41■□□□□ 0.38
CLDN4O14493 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN4O14493 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN4O14493 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.41■□□□□ 0.38
CLDN4O14493 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN4O14493 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLDN4O14493 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
CLDN4O14493 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN4O14493 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN4O14493 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN4O14493 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLDN4O14493 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN4O14493 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 AC063952.2-201ENST00000498792 1227 ntBASIC17.4■□□□□ 0.38
CLDN4O14493 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN4O14493 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN4O14493 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN4O14493 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.4■□□□□ 0.38
CLDN4O14493 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN4O14493 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 AC010240.3-201ENST00000607688 395 ntBASIC17.4■□□□□ 0.38
CLDN4O14493 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLDN4O14493 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLDN4O14493 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN4O14493 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN4O14493 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN4O14493 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN4O14493 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN4O14493 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.39■□□□□ 0.38
CLDN4O14493 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN4O14493 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN4O14493 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN4O14493 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN4O14493 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CLDN4O14493 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 STARP1-201ENST00000397973 869 ntBASIC17.39■□□□□ 0.37
CLDN4O14493 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN4O14493 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN4O14493 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN4O14493 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 MIR3917-201ENST00000580971 93 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms