Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK2O00526 GPAT2P1-201ENST00000444924 1672 ntBASIC14.85□□□□□ -0.03
UPK2O00526 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UPK2O00526 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK2O00526 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 NUDT16P1-203ENST00000513809 620 ntBASIC14.85□□□□□ -0.03
UPK2O00526 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK2O00526 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
UPK2O00526 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.85□□□□□ -0.03
UPK2O00526 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
UPK2O00526 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
UPK2O00526 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UPK2O00526 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK2O00526 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK2O00526 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK2O00526 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.84□□□□□ -0.03
UPK2O00526 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 TSPY20P-201ENST00000450910 630 ntBASIC14.84□□□□□ -0.03
UPK2O00526 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK2O00526 AC097488.1-201ENST00000507834 756 ntBASIC14.84□□□□□ -0.03
UPK2O00526 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK2O00526 AC142381.4-202ENST00000563973 229 ntBASIC14.84□□□□□ -0.03
UPK2O00526 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.84□□□□□ -0.03
UPK2O00526 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
UPK2O00526 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 AC008764.6-201ENST00000595909 2069 ntBASIC14.84□□□□□ -0.03
UPK2O00526 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 AC034236.2-201ENST00000606662 1610 ntBASIC14.84□□□□□ -0.03
UPK2O00526 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
UPK2O00526 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK2O00526 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
UPK2O00526 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK2O00526 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK2O00526 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK2O00526 ESPNP-201ENST00000270691 2015 ntBASIC14.83□□□□□ -0.03
UPK2O00526 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC14.83□□□□□ -0.03
UPK2O00526 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK2O00526 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
UPK2O00526 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
UPK2O00526 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK2O00526 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK2O00526 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
UPK2O00526 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK2O00526 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK2O00526 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK2O00526 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK2O00526 CA15P1-201ENST00000481698 905 ntBASIC14.83□□□□□ -0.04
UPK2O00526 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK2O00526 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK2O00526 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK2O00526 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.83□□□□□ -0.04
UPK2O00526 AP001412.1-201ENST00000608405 714 ntBASIC14.83□□□□□ -0.04
UPK2O00526 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
UPK2O00526 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.83□□□□□ -0.04
UPK2O00526 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK2O00526 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
UPK2O00526 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms