Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.62■□□□□ 0.41
PDLIM1O00151 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDLIM1O00151 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDLIM1O00151 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.61■□□□□ 0.41
PDLIM1O00151 AC120498.8-201ENST00000614275 531 ntBASIC17.61■□□□□ 0.41
PDLIM1O00151 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.61■□□□□ 0.41
PDLIM1O00151 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDLIM1O00151 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.61■□□□□ 0.41
PDLIM1O00151 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 AC008894.3-201ENST00000624324 3103 ntBASIC17.6■□□□□ 0.41
PDLIM1O00151 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 POM121L13P-201ENST00000422362 380 ntBASIC17.6■□□□□ 0.41
PDLIM1O00151 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.6■□□□□ 0.41
PDLIM1O00151 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM1O00151 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PDLIM1O00151 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM1O00151 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.6■□□□□ 0.41
PDLIM1O00151 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM1O00151 AC135776.1-201ENST00000319817 2481 ntBASIC17.6■□□□□ 0.41
PDLIM1O00151 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PDLIM1O00151 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDLIM1O00151 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDLIM1O00151 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PDLIM1O00151 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM1O00151 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM1O00151 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 GNAS-203ENST00000306120 1878 ntBASIC17.59■□□□□ 0.41
PDLIM1O00151 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM1O00151 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM1O00151 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM1O00151 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PDLIM1O00151 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM1O00151 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.59■□□□□ 0.41
PDLIM1O00151 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.59■□□□□ 0.41
PDLIM1O00151 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.59■□□□□ 0.41
PDLIM1O00151 AC006058.3-201ENST00000606217 1069 ntBASIC17.59■□□□□ 0.41
PDLIM1O00151 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.59■□□□□ 0.41
PDLIM1O00151 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PDLIM1O00151 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms