Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC188H7C350 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC188H7C350 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC188H7C350 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC188H7C350 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC188H7C350 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC188H7C350 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AL109659.2-201ENST00000606809 1674 ntBASIC19.24■□□□□ 0.67
CCDC188H7C350 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC188H7C350 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC188H7C350 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC188H7C350 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AC004980.1-204ENST00000429707 299 ntBASIC19.24■□□□□ 0.67
CCDC188H7C350 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC188H7C350 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC188H7C350 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.24■□□□□ 0.67
CCDC188H7C350 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.24■□□□□ 0.67
CCDC188H7C350 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC188H7C350 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CCDC188H7C350 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 AL096828.2-201ENST00000567259 1965 ntBASIC19.24■□□□□ 0.67
CCDC188H7C350 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCDC188H7C350 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.24■□□□□ 0.67
CCDC188H7C350 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC188H7C350 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC188H7C350 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 AC008403.3-201ENST00000598924 454 ntBASIC19.23■□□□□ 0.67
CCDC188H7C350 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 GMCL1P1-201ENST00000463439 1581 ntBASIC19.23■□□□□ 0.67
CCDC188H7C350 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC188H7C350 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC188H7C350 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC188H7C350 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
CCDC188H7C350 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC188H7C350 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC188H7C350 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC188H7C350 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC188H7C350 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC188H7C350 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
CCDC188H7C350 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC188H7C350 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC188H7C350 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CCDC188H7C350 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC188H7C350 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms