Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC092597.1-201ENST00000487352 616 ntBASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 RCC2P3-201ENST00000418112 1537 ntBASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.85■□□□□ 0.29
NPIPA2E9PIF3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 HBZP1-201ENST00000354915 429 ntBASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 HCG4P8-203ENST00000443049 980 ntBASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 AC112497.1-201ENST00000624824 639 ntBASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPIPA2E9PIF3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.83■□□□□ 0.29
NPIPA2E9PIF3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
NPIPA2E9PIF3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPIPA2E9PIF3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 AL512353.2-201ENST00000448759 1962 ntBASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPIPA2E9PIF3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 AC008556.1-201ENST00000610908 2040 ntBASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 AC098818.2-201ENST00000564925 2320 ntBASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPIPA2E9PIF3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms