Protein–RNA interactions for Protein: A6NNJ1

FAM90A9P, Putative protein FAM90A9P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A9PA6NNJ1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 KRT8P45-201ENST00000414328 1447 ntBASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 SLC25A6P5-201ENST00000435663 894 ntBASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AP003041.3-201ENST00000527151 707 ntBASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 LINC01023-201ENST00000606054 436 ntBASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM90A9PA6NNJ1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 AC090340.1-201ENST00000620778 4980 ntBASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 FAM87A-204ENST00000613235 858 ntBASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM90A9PA6NNJ1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 HMGA1P5-201ENST00000412453 271 ntBASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 AC068880.1-201ENST00000507289 2297 ntBASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
FAM90A9PA6NNJ1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms