Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 GPR32P1-201ENST00000601788 811 ntBASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.4■□□□□ 0.54
TBC1D3FA6NER0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D3FA6NER0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TBC1D3FA6NER0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 AP000593.1-201ENST00000393668 712 ntBASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 AC026396.1-201ENST00000419388 421 ntBASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 DRAXINP1-201ENST00000437611 948 ntBASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 TPSP2-201ENST00000561760 610 ntBASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 AL390719.2-201ENST00000606993 987 ntBASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TBC1D3FA6NER0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 TOB2P1-201ENST00000469761 992 ntBASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 AL163051.1-201ENST00000569214 1512 ntBASIC18.38■□□□□ 0.53
TBC1D3FA6NER0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 IGHGP-201ENST00000390555 1178 ntBASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 NUS1P1-201ENST00000446295 882 ntBASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.37■□□□□ 0.53
TBC1D3FA6NER0 AC083906.6-201ENST00000641366 219 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms