Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC66A2RUB6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 AL355802.2-201ENST00000402069 882 ntBASIC20.01■□□□□ 0.79
CCDC66A2RUB6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 PRKY-204ENST00000533551 1019 ntBASIC20.01■□□□□ 0.79
CCDC66A2RUB6 AL162727.3-201ENST00000635661 2787 ntBASIC20.01■□□□□ 0.79
CCDC66A2RUB6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC66A2RUB6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20■□□□□ 0.79
CCDC66A2RUB6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC66A2RUB6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 POM121L13P-201ENST00000422362 380 ntBASIC20■□□□□ 0.79
CCDC66A2RUB6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20■□□□□ 0.79
CCDC66A2RUB6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20■□□□□ 0.79
CCDC66A2RUB6 AC142086.2-201ENST00000569753 217 ntBASIC20■□□□□ 0.79
CCDC66A2RUB6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 AC083906.6-201ENST00000641366 219 ntBASIC20■□□□□ 0.79
CCDC66A2RUB6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20■□□□□ 0.79
CCDC66A2RUB6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC66A2RUB6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCDC66A2RUB6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20■□□□□ 0.79
CCDC66A2RUB6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC66A2RUB6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC66A2RUB6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms