Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
HFM1A2PYH4 AL138781.2-201ENST00000617896 1843 ntBASIC27.25■■□□□ 1.95
HFM1A2PYH4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
HFM1A2PYH4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
HFM1A2PYH4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HFM1A2PYH4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HFM1A2PYH4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 CLEC4GP1-201ENST00000596555 870 ntBASIC27.24■■□□□ 1.95
HFM1A2PYH4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HFM1A2PYH4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
HFM1A2PYH4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
HFM1A2PYH4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 AC090616.6-201ENST00000582640 721 ntBASIC27.24■■□□□ 1.95
HFM1A2PYH4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
HFM1A2PYH4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
HFM1A2PYH4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
HFM1A2PYH4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HFM1A2PYH4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC27.23■■□□□ 1.95
HFM1A2PYH4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
HFM1A2PYH4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HFM1A2PYH4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
HFM1A2PYH4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC27.23■■□□□ 1.95
HFM1A2PYH4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
HFM1A2PYH4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
HFM1A2PYH4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
HFM1A2PYH4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC27.23■■□□□ 1.95
HFM1A2PYH4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
HFM1A2PYH4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC27.22■■□□□ 1.95
HFM1A2PYH4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
HFM1A2PYH4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC27.22■■□□□ 1.95
HFM1A2PYH4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC27.22■■□□□ 1.95
HFM1A2PYH4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
HFM1A2PYH4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC27.22■■□□□ 1.95
HFM1A2PYH4 WIZP1-201ENST00000531444 2299 ntBASIC27.21■■□□□ 1.95
HFM1A2PYH4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HFM1A2PYH4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
HFM1A2PYH4 ESPNP-201ENST00000270691 2015 ntBASIC27.21■■□□□ 1.95
HFM1A2PYH4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
HFM1A2PYH4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 AP005901.3-202ENST00000581653 237 ntBASIC27.21■■□□□ 1.95
HFM1A2PYH4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
HFM1A2PYH4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC27.21■■□□□ 1.95
HFM1A2PYH4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
HFM1A2PYH4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
HFM1A2PYH4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
HFM1A2PYH4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC27.2■■□□□ 1.95
HFM1A2PYH4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
HFM1A2PYH4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.95
HFM1A2PYH4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 AL450487.1-201ENST00000426799 995 ntBASIC27.2■■□□□ 1.94
HFM1A2PYH4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
HFM1A2PYH4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC27.2■■□□□ 1.94
HFM1A2PYH4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms