Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.05■□□□□ 0.96
SYCE3A1L190 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.05■□□□□ 0.96
SYCE3A1L190 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.05■□□□□ 0.96
SYCE3A1L190 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.05■□□□□ 0.96
SYCE3A1L190 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.05■□□□□ 0.96
SYCE3A1L190 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYCE3A1L190 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.04■□□□□ 0.96
SYCE3A1L190 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.04■□□□□ 0.96
SYCE3A1L190 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.04■□□□□ 0.96
SYCE3A1L190 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.04■□□□□ 0.96
SYCE3A1L190 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.04■□□□□ 0.96
SYCE3A1L190 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.04■□□□□ 0.96
SYCE3A1L190 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYCE3A1L190 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.04■□□□□ 0.96
SYCE3A1L190 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC21.03■□□□□ 0.96
SYCE3A1L190 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.03■□□□□ 0.96
SYCE3A1L190 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 MYLKP1-201ENST00000509077 1580 ntBASIC21.03■□□□□ 0.96
SYCE3A1L190 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.03■□□□□ 0.96
SYCE3A1L190 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.03■□□□□ 0.96
SYCE3A1L190 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.03■□□□□ 0.96
SYCE3A1L190 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.03■□□□□ 0.96
SYCE3A1L190 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC21.03■□□□□ 0.96
SYCE3A1L190 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.03■□□□□ 0.96
SYCE3A1L190 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SYCE3A1L190 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYCE3A1L190 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.03■□□□□ 0.96
SYCE3A1L190 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SYCE3A1L190 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
SYCE3A1L190 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SYCE3A1L190 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SYCE3A1L190 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.02■□□□□ 0.96
SYCE3A1L190 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.02■□□□□ 0.96
SYCE3A1L190 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SYCE3A1L190 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 PNMA6B-201ENST00000538162 1200 ntBASIC21.02■□□□□ 0.96
SYCE3A1L190 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.02■□□□□ 0.96
SYCE3A1L190 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.02■□□□□ 0.96
SYCE3A1L190 HLA-B-256ENST00000639848 1089 ntBASIC21.02■□□□□ 0.96
SYCE3A1L190 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
SYCE3A1L190 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SYCE3A1L190 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SYCE3A1L190 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms