Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 GMCL1P1-201ENST00000463439 1581 ntBASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TCRBV3S1A0A5B6 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TCRBV3S1A0A5B6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 AL121761.2-201ENST00000598007 1648 ntBASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 MIPEPP3-201ENST00000412105 444 ntBASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 RCC2P3-201ENST00000418112 1537 ntBASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TCRBV3S1A0A5B6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 PNMA6B-201ENST00000538162 1200 ntBASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 KRT18P55-202ENST00000578578 1546 ntBASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TCRBV3S1A0A5B6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TCRBV3S1A0A5B6 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms