Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX9Q9Y5X1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 ZNF444P1-201ENST00000559497 298 ntBASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 AL121956.5-201ENST00000625261 221 ntBASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX9Q9Y5X1 MYLKP1-201ENST00000509077 1580 ntBASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 AL163051.1-201ENST00000569214 1512 ntBASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX9Q9Y5X1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 AL391807.1-203ENST00000604392 2365 ntBASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 FAM86EP-206ENST00000510506 987 ntBASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 AL136038.4-201ENST00000603606 1261 ntBASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 AL358472.4-201ENST00000633140 710 ntBASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX9Q9Y5X1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX9Q9Y5X1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 SPDYE13P-201ENST00000445314 798 ntBASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 VENTXP5-201ENST00000523979 775 ntBASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 AC009065.1-201ENST00000564055 1225 ntBASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 TNXA-203ENST00000507684 2038 ntBASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX9Q9Y5X1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms