Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 ZNF444P1-201ENST00000559497 298 ntBASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 HYMAI.1-201ENST00000620949 238 ntBASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHGA6Q9Y5G7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 KRT18P48-201ENST00000434763 852 ntBASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 KRT126P-201ENST00000549467 1181 ntBASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 MIR4674-201ENST00000582457 87 ntBASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 AC141586.3-201ENST00000562166 1838 ntBASIC17.82■□□□□ 0.44
PCDHGA6Q9Y5G7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 ZNF815P-204ENST00000434898 1737 ntBASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 TEX21P-204ENST00000641479 1693 ntBASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 AC069148.1-201ENST00000608741 768 ntBASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 AC083849.1-201ENST00000615227 514 ntBASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGA6Q9Y5G7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms