Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB1Q9Y5F3 GPAT2P1-201ENST00000444924 1672 ntBASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 KRT8P45-201ENST00000414328 1447 ntBASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 AL450487.1-201ENST00000426799 995 ntBASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB1Q9Y5F3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AC008556.1-201ENST00000610908 2040 ntBASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AC026396.1-201ENST00000419388 421 ntBASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AP003041.3-201ENST00000527151 707 ntBASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AC116407.4-201ENST00000623319 1061 ntBASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB1Q9Y5F3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB1Q9Y5F3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCDHB1Q9Y5F3 AC090164.3-201ENST00000610780 2143 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms