Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 KRT18P41-201ENST00000518924 1277 ntBASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PCDHB7Q9Y5E2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 NUS1P2-201ENST00000417358 873 ntBASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 MTMR9LP-203ENST00000426597 1545 ntBASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 AC079776.4-201ENST00000511039 504 ntBASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 AP005901.3-202ENST00000581653 237 ntBASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHB7Q9Y5E2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 AC091607.1-201ENST00000490318 1060 ntBASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 AC106795.1-205ENST00000512851 1056 ntBASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 SLC25A6P4-201ENST00000586535 553 ntBASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 AC004263.2-201ENST00000617183 678 ntBASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHB7Q9Y5E2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 AC093484.2-201ENST00000580996 2166 ntBASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHB7Q9Y5E2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHB7Q9Y5E2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms