Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 AC084018.2-201ENST00000613093 2607 ntBASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 PRORSD1P-201ENST00000295112 541 ntBASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 RARRES2P10-201ENST00000564312 460 ntBASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HHLA3Q9XRX5 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 NIFKP9-201ENST00000419265 221 ntBASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 KSR1P1-201ENST00000446298 240 ntBASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 UBE2SP1-201ENST00000450587 669 ntBASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 AL353708.3-201ENST00000610272 989 ntBASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 CEP83-AS1-201ENST00000623122 2482 ntBASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 AC073592.3-201ENST00000625118 1834 ntBASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HHLA3Q9XRX5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HHLA3Q9XRX5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms