Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 AP000867.3-201ENST00000524675 377 ntBASIC21.27■■□□□ 1
SYNPO2Q9UMS6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SYNPO2Q9UMS6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SYNPO2Q9UMS6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 AL031598.1-201ENST00000561511 1773 ntBASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 IGHV3-47-201ENST00000425060 335 ntBASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 AC104819.1-201ENST00000504587 486 ntBASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 AC111152.3-201ENST00000569699 673 ntBASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 AC124864.1-201ENST00000623408 392 ntBASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SYNPO2Q9UMS6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 KRT17P6-201ENST00000453795 1220 ntBASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 AL121772.3-201ENST00000610840 674 ntBASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.25■□□□□ 0.99
SYNPO2Q9UMS6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 AL499627.1-201ENST00000569373 2188 ntBASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 AL845331.1-201ENST00000424978 1190 ntBASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SYNPO2Q9UMS6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 FAAHP1-202ENST00000446499 1238 ntBASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.23■□□□□ 0.99
SYNPO2Q9UMS6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms