Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 B3GAT3P1-201ENST00000471720 806 ntBASIC19■□□□□ 0.63
RABGEF1Q9UJ41 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 AC068587.9-201ENST00000641814 219 ntBASIC19■□□□□ 0.63
RABGEF1Q9UJ41 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19■□□□□ 0.63
RABGEF1Q9UJ41 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 FSCN1P1-201ENST00000568912 1481 ntBASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 KRT18P22-201ENST00000402024 1347 ntBASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RABGEF1Q9UJ41 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 AC008764.6-201ENST00000595909 2069 ntBASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 TERF1P1-201ENST00000311003 1181 ntBASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 AC026271.3-201ENST00000571884 352 ntBASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
RABGEF1Q9UJ41 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 AL049597.2-201ENST00000565575 961 ntBASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 AL589935.2-201ENST00000616471 1231 ntBASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RABGEF1Q9UJ41 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms