Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MBD1Q9UIS9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
MBD1Q9UIS9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MBD1Q9UIS9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 AL512353.2-201ENST00000448759 1962 ntBASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 AC005332.3-201ENST00000589904 676 ntBASIC18.62■□□□□ 0.57
MBD1Q9UIS9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MBD1Q9UIS9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MBD1Q9UIS9 AC018445.3-201ENST00000624177 1945 ntBASIC18.61■□□□□ 0.57
MBD1Q9UIS9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 HOXB1-202ENST00000577092 1414 ntBASIC18.6■□□□□ 0.57
MBD1Q9UIS9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 AL390719.2-201ENST00000606993 987 ntBASIC18.6■□□□□ 0.57
MBD1Q9UIS9 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 GPALPP1-207ENST00000611650 899 ntBASIC18.6■□□□□ 0.57
MBD1Q9UIS9 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MBD1Q9UIS9 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 KRT8P7-201ENST00000533003 1432 ntBASIC18.59■□□□□ 0.57
MBD1Q9UIS9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.59■□□□□ 0.57
MBD1Q9UIS9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms