Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 AC099336.1-202ENST00000602961 463 ntBASIC21.01■□□□□ 0.95
FBXO40Q9UH90 AC138894.3-201ENST00000603787 634 ntBASIC21.01■□□□□ 0.95
FBXO40Q9UH90 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.01■□□□□ 0.95
FBXO40Q9UH90 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FBXO40Q9UH90 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21■□□□□ 0.95
FBXO40Q9UH90 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21■□□□□ 0.95
FBXO40Q9UH90 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21■□□□□ 0.95
FBXO40Q9UH90 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21■□□□□ 0.95
FBXO40Q9UH90 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
FBXO40Q9UH90 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 AC113404.2-201ENST00000507884 177 ntBASIC20.99■□□□□ 0.95
FBXO40Q9UH90 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 AC011840.4-201ENST00000578471 627 ntBASIC20.99■□□□□ 0.95
FBXO40Q9UH90 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FBXO40Q9UH90 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 AC004263.2-201ENST00000617183 678 ntBASIC20.98■□□□□ 0.95
FBXO40Q9UH90 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.98■□□□□ 0.95
FBXO40Q9UH90 AC009102.3-201ENST00000623118 1491 ntBASIC20.98■□□□□ 0.95
FBXO40Q9UH90 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 NSUN5P1-202ENST00000421140 1535 ntBASIC20.98■□□□□ 0.95
FBXO40Q9UH90 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 NSUN5P2-203ENST00000457352 1529 ntBASIC20.98■□□□□ 0.95
FBXO40Q9UH90 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FBXO40Q9UH90 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 AL031008.1-201ENST00000619963 541 ntBASIC20.97■□□□□ 0.95
FBXO40Q9UH90 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms