Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HDAC6Q9UBN7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
HDAC6Q9UBN7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC6Q9UBN7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC6Q9UBN7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC6Q9UBN7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC6Q9UBN7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HDAC6Q9UBN7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AC026396.1-201ENST00000419388 421 ntBASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AC011498.5-201ENST00000592027 486 ntBASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AC079602.3-201ENST00000623931 403 ntBASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
HDAC6Q9UBN7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 AC005082.1-201ENST00000413042 2259 ntBASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
HDAC6Q9UBN7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 AC112497.1-201ENST00000624824 639 ntBASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 AL157888.1-201ENST00000631930 593 ntBASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 AL049812.1-201ENST00000432563 2267 ntBASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.87■□□□□ 0.93
HDAC6Q9UBN7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 AC016734.2-201ENST00000624325 1377 ntBASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HDAC6Q9UBN7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms