Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRFN1Q9P244 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.97■□□□□ 0.31
LRFN1Q9P244 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
LRFN1Q9P244 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 AC116562.4-201ENST00000641316 2276 ntBASIC16.96■□□□□ 0.31
LRFN1Q9P244 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 TSSC2-201ENST00000450217 709 ntBASIC16.96■□□□□ 0.31
LRFN1Q9P244 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.96■□□□□ 0.31
LRFN1Q9P244 KRT8P26-201ENST00000534154 1276 ntBASIC16.96■□□□□ 0.31
LRFN1Q9P244 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 AC093525.10-201ENST00000625130 1569 ntBASIC16.96■□□□□ 0.31
LRFN1Q9P244 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
LRFN1Q9P244 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRFN1Q9P244 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRFN1Q9P244 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRFN1Q9P244 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.96■□□□□ 0.3
LRFN1Q9P244 MTMR9LP-203ENST00000426597 1545 ntBASIC16.96■□□□□ 0.3
LRFN1Q9P244 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LRFN1Q9P244 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRFN1Q9P244 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.95■□□□□ 0.3
LRFN1Q9P244 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 AC016734.2-201ENST00000624325 1377 ntBASIC16.94■□□□□ 0.3
LRFN1Q9P244 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRFN1Q9P244 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.94■□□□□ 0.3
LRFN1Q9P244 AC092119.3-201ENST00000612618 583 ntBASIC16.94■□□□□ 0.3
LRFN1Q9P244 NPAP1P7-201ENST00000613027 823 ntBASIC16.94■□□□□ 0.3
LRFN1Q9P244 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms