Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 AC093525.10-201ENST00000625130 1569 ntBASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 SPEG-225ENST00000617028 815 ntTSL 5 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.19■■□□□ 1.3
C9orf78Q9NZ63 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
C9orf78Q9NZ63 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
C9orf78Q9NZ63 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 CROCCP3-202ENST00000420820 1947 ntBASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 MIR662-201ENST00000384847 95 ntBASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 AL031598.1-201ENST00000561511 1773 ntBASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 AC018445.3-201ENST00000624177 1945 ntBASIC23.16■■□□□ 1.3
C9orf78Q9NZ63 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 AL162741.1-201ENST00000565563 1558 ntBASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 AC098818.2-201ENST00000564925 2320 ntBASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
C9orf78Q9NZ63 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
C9orf78Q9NZ63 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
C9orf78Q9NZ63 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.14■■□□□ 1.3
C9orf78Q9NZ63 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.14■■□□□ 1.3
C9orf78Q9NZ63 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
C9orf78Q9NZ63 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms