Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 RCC2P3-201ENST00000418112 1537 ntBASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CDC42SE2Q9NRR3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC42SE2Q9NRR3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC42SE2Q9NRR3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CDC42SE2Q9NRR3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CDC42SE2Q9NRR3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CDC42SE2Q9NRR3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CDC42SE2Q9NRR3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 MIR935-201ENST00000401179 91 ntBASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 NIFKP9-201ENST00000419265 221 ntBASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 AC091390.4-202ENST00000476426 537 ntBASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CDC42SE2Q9NRR3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 AC004951.3-201ENST00000418645 1148 ntBASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 PPP1R14BP5-201ENST00000440334 435 ntBASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 KRT18P41-201ENST00000518924 1277 ntBASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 AC233263.1-201ENST00000578059 224 ntBASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC42SE2Q9NRR3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC42SE2Q9NRR3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms