Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
HINT3Q9NQE9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 HTR7P1-201ENST00000538670 1336 ntBASIC16.74■□□□□ 0.27
HINT3Q9NQE9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 AL353807.1-201ENST00000427475 662 ntBASIC16.74■□□□□ 0.27
HINT3Q9NQE9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 AC233702.5-201ENST00000584107 538 ntBASIC16.74■□□□□ 0.27
HINT3Q9NQE9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.74■□□□□ 0.27
HINT3Q9NQE9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.73■□□□□ 0.27
HINT3Q9NQE9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 AC004980.1-204ENST00000429707 299 ntBASIC16.73■□□□□ 0.27
HINT3Q9NQE9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HINT3Q9NQE9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 AC008556.1-201ENST00000610908 2040 ntBASIC16.72■□□□□ 0.27
HINT3Q9NQE9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.72■□□□□ 0.27
HINT3Q9NQE9 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms