Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 AL499627.1-201ENST00000569373 2188 ntBASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 KRT18P41-201ENST00000518924 1277 ntBASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
POLR2J3Q9H1A7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 FAM207BP-201ENST00000447172 505 ntBASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 AC128676.1-201ENST00000454392 318 ntBASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 AC130371.2-201ENST00000619443 611 ntBASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
POLR2J3Q9H1A7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 AL357033.4-201ENST00000617703 1807 ntBASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 C1QBPP2-201ENST00000528754 825 ntBASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 AF186192.3-201ENST00000583427 947 ntBASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CR392000.1-201ENST00000624770 1228 ntBASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.12■□□□□ 0.33
POLR2J3Q9H1A7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 FZD10-202ENST00000539839 3282 ntBASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms