Protein–RNA interactions for Protein: Q9H190

SDCBP2, Syntenin-2, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2Q9H190 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 AC034232.1-201ENST00000506026 1064 ntBASIC19.69■□□□□ 0.74
SDCBP2Q9H190 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 AC104581.1-202ENST00000635932 2618 ntBASIC19.69■□□□□ 0.74
SDCBP2Q9H190 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SDCBP2Q9H190 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 AC073592.3-201ENST00000625118 1834 ntBASIC19.68■□□□□ 0.74
SDCBP2Q9H190 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 AC083849.1-201ENST00000615227 514 ntBASIC19.68■□□□□ 0.74
SDCBP2Q9H190 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.68■□□□□ 0.74
SDCBP2Q9H190 AL590326.2-201ENST00000625139 305 ntBASIC19.68■□□□□ 0.74
SDCBP2Q9H190 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SDCBP2Q9H190 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 MIR149-201ENST00000384879 89 ntBASIC19.67■□□□□ 0.74
SDCBP2Q9H190 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 AL031133.1-201ENST00000406807 723 ntBASIC19.67■□□□□ 0.74
SDCBP2Q9H190 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SDCBP2Q9H190 AC009102.3-201ENST00000623118 1491 ntBASIC19.67■□□□□ 0.74
SDCBP2Q9H190 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 AC009113.1-201ENST00000570267 2443 ntBASIC19.66■□□□□ 0.74
SDCBP2Q9H190 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SDCBP2Q9H190 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms