Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 KRIT1-207ENST00000422347 483 ntTSL 55.6□□□□□ -1.511e-5■■■□□ 18
XRN2Q9H0D6 KRIT1-209ENST00000425919 572 ntTSL 55.6□□□□□ -1.511e-5■■■□□ 18
XRN2Q9H0D6 ADD3-220ENST00000497125 763 ntTSL 35.56□□□□□ -1.525e-8■■■□□ 18
XRN2Q9H0D6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.44□□□□□ -1.541e-5■■■□□ 18
XRN2Q9H0D6 RALGAPA1-215ENST00000556839 1305 ntTSL 35.34□□□□□ -1.555e-8■■■□□ 18
XRN2Q9H0D6 RNF19A-206ENST00000519527 817 ntTSL 35.24□□□□□ -1.571e-5■■■□□ 18
XRN2Q9H0D6 ADD3-209ENST00000475954 449 ntTSL 25.16□□□□□ -1.585e-8■■■□□ 18
XRN2Q9H0D6 KRIT1-218ENST00000458493 507 ntTSL 45.07□□□□□ -1.61e-5■■■□□ 18
XRN2Q9H0D6 PLPP3-203ENST00000461655 646 ntTSL 34.96□□□□□ -1.622e-10■■■□□ 18
XRN2Q9H0D6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.631e-5■■■□□ 18
XRN2Q9H0D6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.645e-8■■■□□ 18
XRN2Q9H0D6 C15orf40-210ENST00000563387 419 ntTSL 34.53□□□□□ -1.681e-5■■■□□ 18
XRN2Q9H0D6 ACADM-206ENST00000525808 1422 ntTSL 24.3□□□□□ -1.721e-5■■■□□ 18
XRN2Q9H0D6 PIAS1-204ENST00000563996 1168 ntTSL 53.92□□□□□ -1.781e-5■■■□□ 18
XRN2Q9H0D6 ACADM-209ENST00000526196 1451 ntTSL 1 (best)3.77□□□□□ -1.811e-5■■■□□ 18
XRN2Q9H0D6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.841e-5■■■□□ 18
XRN2Q9H0D6 RALGAPA1-205ENST00000553917 723 ntTSL 33.29□□□□□ -1.885e-8■■■□□ 18
XRN2Q9H0D6 CDK17-209ENST00000551816 626 ntTSL 43.12□□□□□ -1.911e-5■■■□□ 18
XRN2Q9H0D6 SREK1-210ENST00000521691 580 ntTSL 33.04□□□□□ -1.921e-5■■■□□ 18
XRN2Q9H0D6 ADD3-205ENST00000468251 697 ntTSL 52.99□□□□□ -1.935e-8■■■□□ 18
XRN2Q9H0D6 REV3L-206ENST00000434009 10644 ntTSL 22.64□□□□□ -1.992e-18■■■□□ 18
XRN2Q9H0D6 MIR1257-201ENST00000408490 117 ntBASIC0.91□□□□□ -2.265e-8■■■□□ 18
XRN2Q9H0D6 ASB16-AS1-204ENST00000592897 551 ntTSL 422.27■■□□□ 1.163e-8■■■□□ 18
XRN2Q9H0D6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.08■□□□□ 0.483e-8■■■□□ 18
XRN2Q9H0D6 ASB16-AS1-203ENST00000591166 754 ntTSL 39.96□□□□□ -0.823e-8■■■□□ 18
XRN2Q9H0D6 ASB16-AS1-202ENST00000588785 574 ntTSL 38.16□□□□□ -1.13e-8■■■□□ 18
XRN2Q9H0D6 SLC25A10-207ENST00000574129 1523 ntTSL 534.84■■■■□ 3.179e-7■■■□□ 18
XRN2Q9H0D6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.79■■■□□ 2.369e-7■■■□□ 18
XRN2Q9H0D6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.869e-7■■■□□ 18
XRN2Q9H0D6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.43■■□□□ 1.189e-7■■■□□ 18
XRN2Q9H0D6 CCNG2-203ENST00000497512 2051 ntTSL 1 (best)27.23■■□□□ 1.955e-8■■■□□ 18
XRN2Q9H0D6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.355e-8■■■□□ 18
XRN2Q9H0D6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.235e-8■■■□□ 18
XRN2Q9H0D6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.25e-8■■■□□ 18
XRN2Q9H0D6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.195e-8■■■□□ 18
XRN2Q9H0D6 FBXO5-201ENST00000229758 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.235e-8■■■□□ 18
XRN2Q9H0D6 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.485e-8■■■□□ 18
XRN2Q9H0D6 UBAC1-204ENST00000478485 773 ntTSL 228.13■■■□□ 2.095e-9■■■□□ 18
XRN2Q9H0D6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.218e-7■■■□□ 18
XRN2Q9H0D6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.18e-7■■■□□ 18
XRN2Q9H0D6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 08e-7■■■□□ 18
XRN2Q9H0D6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.068e-7■■■□□ 18
XRN2Q9H0D6 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.918e-7■■■□□ 18
XRN2Q9H0D6 EIF5-203ENST00000558265 872 ntTSL 516.73■□□□□ 0.272e-11■■■□□ 18
XRN2Q9H0D6 EIF5-204ENST00000558316 719 ntTSL 316.51■□□□□ 0.232e-11■■■□□ 18
XRN2Q9H0D6 EIF5-213ENST00000560200 776 ntTSL 55.8□□□□□ -1.482e-11■■■□□ 18
XRN2Q9H0D6 CAPN15-202ENST00000562370 942 ntTSL 232.41■■■□□ 2.782e-6■■■□□ 18
XRN2Q9H0D6 CAPN15-207ENST00000568988 911 ntTSL 332.41■■■□□ 2.782e-6■■■□□ 18
XRN2Q9H0D6 CHN2-203ENST00000409350 539 ntTSL 415.28■□□□□ 0.043e-6■■■□□ 18
XRN2Q9H0D6 CHN2-205ENST00000409964 547 ntTSL 412.77□□□□□ -0.373e-6■■■□□ 18
XRN2Q9H0D6 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC11.5□□□□□ -0.573e-6■■■□□ 18
XRN2Q9H0D6 MUS81-208ENST00000529742 733 ntTSL 220.27■□□□□ 0.841e-8■■■□□ 18
XRN2Q9H0D6 MUS81-216ENST00000533519 694 ntTSL 216.97■□□□□ 0.311e-8■■■□□ 18
XRN2Q9H0D6 MUS81-203ENST00000525006 434 ntTSL 37.08□□□□□ -1.281e-8■■■□□ 18
XRN2Q9H0D6 LCAT-208ENST00000575467 842 ntTSL 522.51■■□□□ 1.195e-11■■■□□ 18
XRN2Q9H0D6 LCAT-204ENST00000570980 1240 ntTSL 222.4■■□□□ 1.185e-11■■■□□ 18
XRN2Q9H0D6 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.95e-11■■■□□ 18
XRN2Q9H0D6 INTS11-223ENST00000498173 1589 ntTSL 224.34■■□□□ 1.493e-6■■■□□ 18
XRN2Q9H0D6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.31■■□□□ 1.483e-6■■■□□ 18
XRN2Q9H0D6 INTS11-220ENST00000493534 896 ntTSL 323.22■■□□□ 1.313e-6■■■□□ 18
XRN2Q9H0D6 INTS11-215ENST00000470679 584 ntTSL 522.77■■□□□ 1.245e-6■■■□□ 18
XRN2Q9H0D6 INTS11-224ENST00000498476 554 ntTSL 421.86■■□□□ 1.095e-6■■■□□ 18
XRN2Q9H0D6 INTS11-239ENST00000531019 549 ntTSL 421.86■■□□□ 1.095e-6■■■□□ 18
XRN2Q9H0D6 INTS11-219ENST00000490853 704 ntTSL 321.58■■□□□ 1.055e-6■■■□□ 18
XRN2Q9H0D6 INTS11-221ENST00000496353 2428 ntTSL 218.58■□□□□ 0.563e-6■■■□□ 18
XRN2Q9H0D6 INTS11-226ENST00000525285 579 ntTSL 417.02■□□□□ 0.325e-6■■■□□ 18
XRN2Q9H0D6 INTS11-244ENST00000532952 773 ntTSL 316.32■□□□□ 0.25e-6■■■□□ 18
XRN2Q9H0D6 INTS11-246ENST00000534345 485 ntTSL 413.74□□□□□ -0.215e-6■■■□□ 18
XRN2Q9H0D6 GOLGA2-209ENST00000490257 1964 ntTSL 220.3■□□□□ 0.841e-6■■■□□ 18
XRN2Q9H0D6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.761e-6■■■□□ 17.9
XRN2Q9H0D6 DAZAP1-204ENST00000586579 619 ntTSL 326.71■■□□□ 1.871e-7■■■□□ 17.9
XRN2Q9H0D6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.58■□□□□ 0.41e-8■■■□□ 17.9
XRN2Q9H0D6 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)21.32■■□□□ 12e-7■■■□□ 17.9
XRN2Q9H0D6 SMARCA1-201ENST00000371121 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.687e-8■■■□□ 17.9
XRN2Q9H0D6 SMARCA1-205ENST00000617310 4291 ntTSL 210.44□□□□□ -0.747e-8■■■□□ 17.9
XRN2Q9H0D6 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.977e-8■■■□□ 17.9
XRN2Q9H0D6 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.117e-8■■■□□ 17.9
XRN2Q9H0D6 SMARCA1-204ENST00000478420 561 ntTSL 34.29□□□□□ -1.727e-8■■■□□ 17.9
XRN2Q9H0D6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.059e-8■■■□□ 17.9
XRN2Q9H0D6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.889e-8■■■□□ 17.9
XRN2Q9H0D6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.659e-8■■■□□ 17.9
XRN2Q9H0D6 NFATC3-209ENST00000561714 792 ntTSL 328.2■■■□□ 2.13e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-219ENST00000568466 737 ntTSL 226.03■■□□□ 1.763e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.39■□□□□ 0.213e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-217ENST00000566893 715 ntTSL 213.79□□□□□ -0.23e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-213ENST00000563319 4122 ntTSL 1 (best)11.08□□□□□ -0.643e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-208ENST00000553077 3870 ntTSL 210.18□□□□□ -0.783e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-220ENST00000569766 3555 ntTSL 1 (best)8.93□□□□□ -0.983e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-207ENST00000549350 3588 ntTSL 27□□□□□ -1.293e-6■■■□□ 17.9
XRN2Q9H0D6 NFATC3-216ENST00000566301 3840 ntTSL 1 (best)6.82□□□□□ -1.323e-6■■■□□ 17.9
XRN2Q9H0D6 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.09□□□□□ -1.593e-6■■■□□ 17.9
XRN2Q9H0D6 MAP3K11-206ENST00000527304 5605 nt17.32■□□□□ 0.361e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-218ENST00000560196 1014 ntTSL 1 (best)15.49■□□□□ 0.075e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-206ENST00000488625 6026 ntTSL 1 (best)9.82□□□□□ -0.845e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-203ENST00000424869 887 ntTSL 59.24□□□□□ -0.935e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-223ENST00000561304 1383 ntTSL 1 (best)8.88□□□□□ -0.995e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-211ENST00000558440 886 ntTSL 1 (best)7.47□□□□□ -1.215e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.285e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-204ENST00000437844 6246 ntTSL 1 (best)6.51□□□□□ -1.375e-6■■■□□ 17.9
XRN2Q9H0D6 ZEB1-217ENST00000559858 2745 ntTSL 1 (best)6.15□□□□□ -1.425e-6■■■□□ 17.9
Retrieved 100 of 21,068 protein–RNA pairs in 251 ms