RNA–Protein interactions for RNA: ENST00000553917.5

RALGAPA1-205, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-205ENST00000553917 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
RALGAPA1-205ENST00000553917 CHIC1Q5VXU3 224 aa19.56■□□□□ 0.72
RALGAPA1-205ENST00000553917 SENP3Q9H4L4 574 aaPredicted RBP17.92■□□□□ 0.46
RALGAPA1-205ENST00000553917 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
RALGAPA1-205ENST00000553917 FOXD1Q16676 465 aa16.76■□□□□ 0.27
RALGAPA1-205ENST00000553917 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
RALGAPA1-205ENST00000553917 MSH5O43196 834 aa15.89■□□□□ 0.13
RALGAPA1-205ENST00000553917 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
RALGAPA1-205ENST00000553917 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
RALGAPA1-205ENST00000553917 ADRA2BP18089 450 aa15.25■□□□□ 0.03
RALGAPA1-205ENST00000553917 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
RALGAPA1-205ENST00000553917 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
RALGAPA1-205ENST00000553917 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
RALGAPA1-205ENST00000553917 CACNB1Q02641 598 aaPredicted RBP14.04□□□□□ -0.16
RALGAPA1-205ENST00000553917 SCAF1Q9H7N4 1312 aaKnown RBP13.93□□□□□ -0.18
RALGAPA1-205ENST00000553917 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
RALGAPA1-205ENST00000553917 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
RALGAPA1-205ENST00000553917 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
RALGAPA1-205ENST00000553917 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
RALGAPA1-205ENST00000553917 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
RALGAPA1-205ENST00000553917 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
RALGAPA1-205ENST00000553917 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
RALGAPA1-205ENST00000553917 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
RALGAPA1-205ENST00000553917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.353e-10■□□□□ 8.2
RALGAPA1-205ENST00000553917 POTEHQ6S545 545 aa12.77□□□□□ -0.37
RALGAPA1-205ENST00000553917 NCBP3Q53F19 620 aaKnown RBP12.66□□□□□ -0.38
RALGAPA1-205ENST00000553917 CAPN15O75808 1086 aa12.54□□□□□ -0.4
RALGAPA1-205ENST00000553917 DSG3P32926 999 aa12.47□□□□□ -0.41
RALGAPA1-205ENST00000553917 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
RALGAPA1-205ENST00000553917 U3KPZ7 1027 aaPredicted RBP12.45□□□□□ -0.42
RALGAPA1-205ENST00000553917 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
RALGAPA1-205ENST00000553917 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
RALGAPA1-205ENST00000553917 ABCB7O75027 752 aa12.21□□□□□ -0.45
RALGAPA1-205ENST00000553917 APLP2Q06481 763 aa12.09□□□□□ -0.47
RALGAPA1-205ENST00000553917 ZNF219Q9P2Y4 722 aaPredicted RBP12.09□□□□□ -0.47
RALGAPA1-205ENST00000553917 SLC4A2P04920 1241 aa11.98□□□□□ -0.49
RALGAPA1-205ENST00000553917 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
RALGAPA1-205ENST00000553917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.93□□□□□ -0.5
RALGAPA1-205ENST00000553917 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
RALGAPA1-205ENST00000553917 CHRDL2Q6WN34 429 aa11.9□□□□□ -0.5
RALGAPA1-205ENST00000553917 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
RALGAPA1-205ENST00000553917 KCNA4P22459 653 aa11.77□□□□□ -0.53
RALGAPA1-205ENST00000553917 POLA2Q14181 598 aa11.72□□□□□ -0.53
RALGAPA1-205ENST00000553917 SP7Q8TDD2 431 aaPredicted RBP11.72□□□□□ -0.53
RALGAPA1-205ENST00000553917 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
RALGAPA1-205ENST00000553917 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
RALGAPA1-205ENST00000553917 HAX1O00165 279 aa11.51□□□□□ -0.57
RALGAPA1-205ENST00000553917 PIP4P2Q8N4L2 257 aa11.5□□□□□ -0.57
RALGAPA1-205ENST00000553917 REM2Q8IYK8 340 aaPredicted RBP11.46□□□□□ -0.57
RALGAPA1-205ENST00000553917 ZBTB12Q9Y330 459 aaPredicted RBP11.4□□□□□ -0.58
RALGAPA1-205ENST00000553917 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
RALGAPA1-205ENST00000553917 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
RALGAPA1-205ENST00000553917 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
RALGAPA1-205ENST00000553917 FXR2P51116 673 aaKnown RBP eCLIP11.29□□□□□ -0.6
RALGAPA1-205ENST00000553917 EVX2Q03828 476 aa11.24□□□□□ -0.61
RALGAPA1-205ENST00000553917 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
RALGAPA1-205ENST00000553917 PRKAR2AP13861 404 aaKnown RBP11.09□□□□□ -0.63
RALGAPA1-205ENST00000553917 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
RALGAPA1-205ENST00000553917 SLC4A1APQ9BWU0 796 aaKnown RBP11.04□□□□□ -0.64
RALGAPA1-205ENST00000553917 LHX8Q68G74 356 aa11.01□□□□□ -0.65
RALGAPA1-205ENST00000553917 SPDYE2BA6NHP3 402 aa11□□□□□ -0.65
RALGAPA1-205ENST00000553917 SPDYE6P0CI01 402 aa11□□□□□ -0.65
RALGAPA1-205ENST00000553917 SPDYE2Q495Y8 402 aa11□□□□□ -0.65
RALGAPA1-205ENST00000553917 GABBR2O75899 941 aa10.97□□□□□ -0.65
RALGAPA1-205ENST00000553917 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
RALGAPA1-205ENST00000553917 FBLN2P98095 1184 aa10.96□□□□□ -0.65
RALGAPA1-205ENST00000553917 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
RALGAPA1-205ENST00000553917 CHADLQ6NUI6 762 aa10.87□□□□□ -0.67
RALGAPA1-205ENST00000553917 PLSCR2Q9NRY7 297 aa10.87□□□□□ -0.67
RALGAPA1-205ENST00000553917 ZNF692Q9BU19 519 aaPredicted RBP10.85□□□□□ -0.67
RALGAPA1-205ENST00000553917 ATXN8OSP0DMR3 200 aa10.78□□□□□ -0.68
RALGAPA1-205ENST00000553917 ZBTB22O15209 634 aa10.77□□□□□ -0.69
RALGAPA1-205ENST00000553917 PRR29P0C7W0 189 aa10.76□□□□□ -0.69
RALGAPA1-205ENST00000553917 SSUH2Q9Y2M2 353 aa10.75□□□□□ -0.69
RALGAPA1-205ENST00000553917 MKRN4PQ13434 485 aaPredicted RBP10.73□□□□□ -0.69
RALGAPA1-205ENST00000553917 CD44P16070 742 aaKnown RBP10.7□□□□□ -0.7
RALGAPA1-205ENST00000553917 POTEIP0CG38 1075 aa10.69□□□□□ -0.7
RALGAPA1-205ENST00000553917 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
RALGAPA1-205ENST00000553917 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
RALGAPA1-205ENST00000553917 FARP1Q9Y4F1 1045 aaPredicted RBP10.6□□□□□ -0.71
RALGAPA1-205ENST00000553917 CLCN6P51797 869 aa10.53□□□□□ -0.72
RALGAPA1-205ENST00000553917 ZRANB1Q9UGI0 708 aa10.49□□□□□ -0.73
RALGAPA1-205ENST00000553917 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
RALGAPA1-205ENST00000553917 OTUD5Q96G74 571 aa10.42□□□□□ -0.74
RALGAPA1-205ENST00000553917 POTEMA6NI47 508 aa10.41□□□□□ -0.74
RALGAPA1-205ENST00000553917 GALR2O43603 387 aaPredicted RBP10.4□□□□□ -0.74
RALGAPA1-205ENST00000553917 POTEGQ6S5H5 508 aa10.37□□□□□ -0.75
RALGAPA1-205ENST00000553917 POTEB2H3BUK9 544 aa10.34□□□□□ -0.75
RALGAPA1-205ENST00000553917 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
RALGAPA1-205ENST00000553917 PHF12Q96QT6 1004 aa10.3□□□□□ -0.76
RALGAPA1-205ENST00000553917 CREBZFQ9NS37 354 aa10.3□□□□□ -0.76
RALGAPA1-205ENST00000553917 PELP1Q8IZL8 1130 aaKnown RBP10.22□□□□□ -0.77
RALGAPA1-205ENST00000553917 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
RALGAPA1-205ENST00000553917 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
RALGAPA1-205ENST00000553917 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
RALGAPA1-205ENST00000553917 FAM163AQ96GL9 167 aaPredicted RBP10.16□□□□□ -0.78
RALGAPA1-205ENST00000553917 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
RALGAPA1-205ENST00000553917 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
RALGAPA1-205ENST00000553917 SLC39A7Q92504 469 aa10.12□□□□□ -0.79
RALGAPA1-205ENST00000553917 C7P10643 843 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms