Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC211429.1-201ENST00000415277 523 ntBASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCSER1Q9C0I3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.7■□□□□ 0.91
CCSER1Q9C0I3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCSER1Q9C0I3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 ECEL1P3-201ENST00000427961 737 ntBASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 SEC1P-202ENST00000473944 940 ntBASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 AL138966.2-201ENST00000621997 464 ntBASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCSER1Q9C0I3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 GMCL1P1-201ENST00000463439 1581 ntBASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CCSER1Q9C0I3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 LINC01023-201ENST00000606054 436 ntBASIC20.68■□□□□ 0.9
CCSER1Q9C0I3 AC010240.3-201ENST00000607688 395 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms