Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 HOXB1-202ENST00000577092 1414 ntBASIC20.3■□□□□ 0.84
TRIM6Q9C030 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6Q9C030 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM6Q9C030 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.3■□□□□ 0.84
TRIM6Q9C030 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.3■□□□□ 0.84
TRIM6Q9C030 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TRIM6Q9C030 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 MIR3917-201ENST00000580971 93 ntBASIC20.3■□□□□ 0.84
TRIM6Q9C030 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.3■□□□□ 0.84
TRIM6Q9C030 AL157888.1-201ENST00000631930 593 ntBASIC20.3■□□□□ 0.84
TRIM6Q9C030 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 AC005332.7-201ENST00000614046 2005 ntBASIC20.3■□□□□ 0.84
TRIM6Q9C030 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM6Q9C030 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 AL161938.1-201ENST00000569833 2180 ntBASIC20.29■□□□□ 0.84
TRIM6Q9C030 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 AC093458.2-201ENST00000623150 629 ntBASIC20.29■□□□□ 0.84
TRIM6Q9C030 AC116407.4-201ENST00000623319 1061 ntBASIC20.29■□□□□ 0.84
TRIM6Q9C030 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 AC068587.9-201ENST00000641814 219 ntBASIC20.29■□□□□ 0.84
TRIM6Q9C030 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM6Q9C030 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM6Q9C030 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 AC116562.4-201ENST00000641316 2276 ntBASIC20.28■□□□□ 0.84
TRIM6Q9C030 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 AC104390.1-201ENST00000555663 520 ntBASIC20.28■□□□□ 0.84
TRIM6Q9C030 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM6Q9C030 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 AC006333.2-201ENST00000607957 2099 ntBASIC20.28■□□□□ 0.84
TRIM6Q9C030 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM6Q9C030 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 BCL2-203ENST00000589955 5011 ntBASIC20.27■□□□□ 0.84
TRIM6Q9C030 HEIH-201ENST00000623091 1652 ntBASIC20.27■□□□□ 0.84
TRIM6Q9C030 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 AC010240.3-201ENST00000607688 395 ntBASIC20.27■□□□□ 0.84
TRIM6Q9C030 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM6Q9C030 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRIM6Q9C030 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM6Q9C030 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TRIM6Q9C030 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM6Q9C030 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6Q9C030 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM6Q9C030 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6Q9C030 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRIM6Q9C030 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM6Q9C030 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRIM6Q9C030 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM6Q9C030 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms