Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 AL732292.2-201ENST00000609649 430 ntBASIC19.29■□□□□ 0.68
LRRC3Q9BY71 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LRRC3Q9BY71 KRT89P-201ENST00000620027 1478 ntBASIC19.28■□□□□ 0.68
LRRC3Q9BY71 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AL161938.1-201ENST00000569833 2180 ntBASIC19.28■□□□□ 0.68
LRRC3Q9BY71 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 FDX1P1-201ENST00000449115 551 ntBASIC19.28■□□□□ 0.68
LRRC3Q9BY71 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 IFNL4P1-201ENST00000607083 540 ntBASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 AC116562.4-201ENST00000641316 2276 ntBASIC19.28■□□□□ 0.68
LRRC3Q9BY71 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.28■□□□□ 0.68
LRRC3Q9BY71 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 IGHV3-41-201ENST00000613121 348 ntBASIC19.27■□□□□ 0.68
LRRC3Q9BY71 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC3Q9BY71 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC3Q9BY71 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.27■□□□□ 0.67
LRRC3Q9BY71 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.27■□□□□ 0.67
LRRC3Q9BY71 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC3Q9BY71 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 AL163051.1-201ENST00000569214 1512 ntBASIC19.26■□□□□ 0.67
LRRC3Q9BY71 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 AC233702.3-201ENST00000578656 1387 ntBASIC19.26■□□□□ 0.67
LRRC3Q9BY71 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC3Q9BY71 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms