Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 AC133681.1-201ENST00000465482 601 ntBASIC11.04□□□□□ -0.64
LIMD2Q9BT23 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 FAM197Y4-202ENST00000622692 608 ntBASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AC131212.4-201ENST00000623606 975 ntBASIC11.04□□□□□ -0.64
LIMD2Q9BT23 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AL138781.2-201ENST00000617896 1843 ntBASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 AL390961.4-201ENST00000623958 2535 ntBASIC11.04□□□□□ -0.64
LIMD2Q9BT23 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TEX21P-204ENST00000641479 1693 ntBASIC11.04□□□□□ -0.64
LIMD2Q9BT23 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
LIMD2Q9BT23 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 AC018470.1-201ENST00000624790 3129 ntBASIC11.03□□□□□ -0.64
LIMD2Q9BT23 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 AL391005.1-201ENST00000623953 2435 ntBASIC11.03□□□□□ -0.64
LIMD2Q9BT23 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 F2R-202ENST00000505600 442 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ADM-205ENST00000528544 586 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 AC139713.2-201ENST00000641328 2723 ntBASIC11.03□□□□□ -0.64
LIMD2Q9BT23 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LIMD2Q9BT23 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 AL135905.2-201ENST00000584934 1404 ntBASIC11.02□□□□□ -0.64
LIMD2Q9BT23 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LIMD2Q9BT23 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms