Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA3Q99618 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA3Q99618 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.22■□□□□ 0.67
CDCA3Q99618 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA3Q99618 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA3Q99618 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.22■□□□□ 0.67
CDCA3Q99618 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA3Q99618 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.22■□□□□ 0.67
CDCA3Q99618 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDCA3Q99618 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.21■□□□□ 0.67
CDCA3Q99618 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CDCA3Q99618 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.21■□□□□ 0.67
CDCA3Q99618 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.21■□□□□ 0.67
CDCA3Q99618 PGAM5P1-201ENST00000518923 814 ntBASIC19.21■□□□□ 0.67
CDCA3Q99618 IGHV3-22-201ENST00000520721 359 ntBASIC19.21■□□□□ 0.67
CDCA3Q99618 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.21■□□□□ 0.67
CDCA3Q99618 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.21■□□□□ 0.67
CDCA3Q99618 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 AC011467.2-201ENST00000598425 242 ntBASIC19.21■□□□□ 0.67
CDCA3Q99618 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.21■□□□□ 0.67
CDCA3Q99618 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.21■□□□□ 0.67
CDCA3Q99618 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDCA3Q99618 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.21■□□□□ 0.67
CDCA3Q99618 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDCA3Q99618 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDCA3Q99618 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.2■□□□□ 0.66
CDCA3Q99618 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.2■□□□□ 0.66
CDCA3Q99618 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 LINC01006-201ENST00000333319 2292 ntBASIC19.2■□□□□ 0.66
CDCA3Q99618 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.2■□□□□ 0.66
CDCA3Q99618 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCA3Q99618 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.2■□□□□ 0.66
CDCA3Q99618 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.2■□□□□ 0.66
CDCA3Q99618 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.2■□□□□ 0.66
CDCA3Q99618 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDCA3Q99618 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDCA3Q99618 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CDCA3Q99618 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CDCA3Q99618 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA3Q99618 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 AP005117.1-201ENST00000584346 1413 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 AC104109.2-201ENST00000602919 1418 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA3Q99618 HLA-J-201ENST00000462773 1622 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA3Q99618 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA3Q99618 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.19■□□□□ 0.66
CDCA3Q99618 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 AL138831.2-201ENST00000606564 490 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 AL691403.2-201ENST00000618460 490 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 AC009154.2-201ENST00000621177 724 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CDCA3Q99618 AC009102.3-201ENST00000623118 1491 ntBASIC19.19■□□□□ 0.66
CDCA3Q99618 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA3Q99618 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.19■□□□□ 0.66
CDCA3Q99618 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDCA3Q99618 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CDCA3Q99618 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.18■□□□□ 0.66
CDCA3Q99618 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.18■□□□□ 0.66
CDCA3Q99618 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.18■□□□□ 0.66
CDCA3Q99618 AC112907.3-201ENST00000577781 2400 ntBASIC19.18■□□□□ 0.66
CDCA3Q99618 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDCA3Q99618 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms