Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.31■□□□□ 0.04
S1PR3Q99500 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
S1PR3Q99500 AP000692.2-201ENST00000608391 879 ntBASIC15.31■□□□□ 0.04
S1PR3Q99500 DGCR10-201ENST00000609839 495 ntBASIC15.31■□□□□ 0.04
S1PR3Q99500 AC026471.5-201ENST00000615068 467 ntBASIC15.31■□□□□ 0.04
S1PR3Q99500 AC068587.9-201ENST00000641814 219 ntBASIC15.31■□□□□ 0.04
S1PR3Q99500 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.31■□□□□ 0.04
S1PR3Q99500 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.31■□□□□ 0.04
S1PR3Q99500 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.31■□□□□ 0.04
S1PR3Q99500 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
S1PR3Q99500 NFIC-211ENST00000641145 8399 ntBASIC15.31■□□□□ 0.04
S1PR3Q99500 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
S1PR3Q99500 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.31■□□□□ 0.04
S1PR3Q99500 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.31■□□□□ 0.04
S1PR3Q99500 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.31■□□□□ 0.04
S1PR3Q99500 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
S1PR3Q99500 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
S1PR3Q99500 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
S1PR3Q99500 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
S1PR3Q99500 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
S1PR3Q99500 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 TSPY7P-201ENST00000431358 1114 ntBASIC15.3■□□□□ 0.04
S1PR3Q99500 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.3■□□□□ 0.04
S1PR3Q99500 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 SNORA78-201ENST00000459373 127 ntBASIC15.3■□□□□ 0.04
S1PR3Q99500 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.3■□□□□ 0.04
S1PR3Q99500 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
S1PR3Q99500 MIR4785-201ENST00000585005 73 ntBASIC15.3■□□□□ 0.04
S1PR3Q99500 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
S1PR3Q99500 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.3■□□□□ 0.04
S1PR3Q99500 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
S1PR3Q99500 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.3■□□□□ 0.04
S1PR3Q99500 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
S1PR3Q99500 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.29■□□□□ 0.04
S1PR3Q99500 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.29■□□□□ 0.04
S1PR3Q99500 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
S1PR3Q99500 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.29■□□□□ 0.04
S1PR3Q99500 AC008040.2-201ENST00000461049 708 ntBASIC15.29■□□□□ 0.04
S1PR3Q99500 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.29■□□□□ 0.04
S1PR3Q99500 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.29■□□□□ 0.04
S1PR3Q99500 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 SLC25A1P4-201ENST00000567977 778 ntBASIC15.29■□□□□ 0.04
S1PR3Q99500 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 MIR4497-201ENST00000583208 89 ntBASIC15.29■□□□□ 0.04
S1PR3Q99500 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.29■□□□□ 0.04
S1PR3Q99500 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.29■□□□□ 0.04
S1PR3Q99500 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
S1PR3Q99500 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
S1PR3Q99500 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.29■□□□□ 0.04
S1PR3Q99500 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 BICD1-207ENST00000551848 1962 ntBASIC15.29■□□□□ 0.04
S1PR3Q99500 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 AC073592.3-201ENST00000625118 1834 ntBASIC15.29■□□□□ 0.04
S1PR3Q99500 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
S1PR3Q99500 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.28■□□□□ 0.04
S1PR3Q99500 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 AC112777.1-201ENST00000540175 1423 ntBASIC15.28■□□□□ 0.04
S1PR3Q99500 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.28■□□□□ 0.04
S1PR3Q99500 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
S1PR3Q99500 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms